PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0002s0204.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 305aa    MW: 34619.2 Da    PI: 8.6011
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0002s0204.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.81.4e-1343122275
             trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 
                          Wt  ev++L +a+re+ er ++g      k ++ +W ++ + ++ + ++rs++qC++kwe+l  ++kk+ + e++   ++
  Mapoly0002s0204.2.p  43 WTVPEVMVLQAAKREDFERHSKGglkekhKTAQERWLWIEDICWGHAIHRSAQQCQDKWESLVPEFKKVLDYERNLPIGQ 122
                          **************99999998644444468899***********************************99999864444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.31939105IPR017877Myb-like domain
PfamPF138375.0E-1042117No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGEHPSEVLA GDHRAMSVDE DVVYEEPGHA GSRKGRVYKK GAWTVPEVMV LQAAKREDFE  60
RHSKGGLKEK HKTAQERWLW IEDICWGHAI HRSAQQCQDK WESLVPEFKK VLDYERNLPI  120
GQKSYWLMIP EERKKTPKLP PNLPKEVFSA LFEWYLKSKT IDQGDLLVDN STPPRTGNSS  180
SMAGSNGEFS GIEGEGTNDN RTSGLKRKLH SKTVDGVGSV LEGNNKNVVA AMMKCEDRKD  240
KRHRDKLELS LQRHRETMEM NMQRHRESLE LNQKLGEGYI SALCSIGEGL KQLVNTLQST  300
SRHM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001781910.14e-82predicted protein
TrEMBLA9TTI74e-82A9TTI7_PHYPA; Predicted protein
STRINGPP1S314_53V6.11e-81(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-18Trihelix family protein